Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX399861: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-307551' containing sample 'TRUG0036'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.3M spots, 455.3M bases, 222.7Mb downloads

UUID: 6b4d88c2-1f41-4cdd-88f6-e8dcc96f9065

Design: Illumina sequencing of Mycobacterium tuberculosis TRUG0036 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - CDRC Alland

PRJNA223552 • SRP034097 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TRUG0036

SAMN02380997 • SRS515053 • All experiments • All runs

Organism: Mycobacterium tuberculosis UT0036

Library:

Name: Pond-307551

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 417328.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YIR8

material_type: DNA:DNA Somatic

product_order: PDO-2212

product_part_number: P-MCV-0001

project: G49384

research_project: RP-114

root_sample_id: SM-4Q7Z1

sample_id: SM-4YIR8

work_request: 38583

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-20 22:21:13.0	GAPipeline	RTA1.17.20	Sequencer Application 2.0.5

Runs: 1 run, 2.3M spots, 455.3M bases, 222.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1062887	2,253,773	455.3M	222.7Mb	2013-12-27

ID:: 574304

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